Temporarily instrument MCPAuthMiddleware to emit one log line per
on_call_tool and one per _extract_token. Needed to diagnose why
workspace-scoped JWTs forwarded by Pallas land on tool calls with
'Authentication required. Provide a Bearer token.'
Logs include header names, auth-header length+prefix, and the request
URL so we can tell in one turn whether the header is missing, present
but rejected, or get_http_request() raised. Also adds lowercase-bearer
tolerance for clients that normalize to lowercase.
Demote to DEBUG once the end-to-end path is green.
Health probes (Pallas health pollers, agent startup checks) call get_health
without a bearer token. Auth should only be required for data-access tools.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Mark per-turn JWT access control as implemented in the Mnemosyne
integration docs. Update Phase 2/3 status tables, replace deferred
language with concrete implementation details, and document the
`MCPSigningKey` model, `resolve_mcp_jwt`, and `_scope_from_claims`
components now live in the MCP server.
Daedalus may send `file_type` as a MIME type (e.g. `text/markdown`) rather
than a bare extension. Add a `_normalize_file_type` helper with a MIME→ext
lookup table and sensible fallbacks so ingested items are stored with
proper extensions like `md` instead of `text/markdown`.
Update `_check_s3` to read S3 settings from the `STORAGES` dict instead of
deprecated top-level `AWS_*` settings. Skip the check when local storage
is enabled and return an error early if no bucket is configured.
- Change app healthcheck from /live/ to /ready/ to verify full
readiness including dependencies (DB, Neo4j, S3)
- Increase healthcheck timeout from 5s to 10s to accommodate
dependency checks
- Add S3 bucket connectivity check to readiness probe
- Update deployment documentation to use /srv/mnemosyne instead
of /opt/mnemosyne as the compose project directory
- Add Docker DNS resolver to prevent stale upstream IPs after container restarts
- Preserve X-Forwarded-Proto from HAProxy for correct HTTPS detection
- Mount mnemosyne-media volume for direct /media/ serving
- Add IP allowlisting for probe/metrics endpoints (RFC1918 + loopback)
- Fix access_log inheritance so probe paths are properly suppressed
- Expand inline documentation covering routing model and conventions
Replace the minimal placeholder .env.example with a comprehensive template
documenting every variable consumed by docker-compose.yaml, organized by
service (Django core, HTTP, Postgres, Neo4j, Memcached, S3/MinIO, Daedalus,
Celery/RabbitMQ, etc.). Clarifies that this file is rendered from an Ansible
Jinja2 template with vaulted secrets in production, and distinguishes it
from the in-tree mnemosyne/.env used for bare-Python development.
Reorganize Docker Compose services: the Django/gunicorn container is now
`app` and nginx is `web`, better reflecting their roles. Add a dedicated
gunicorn configuration and install curl in the runtime image for health
checks.
Update documentation to reflect:
- Neo4j migration from ariel.incus to a dedicated umbriel.incus instance
- Rationale for requiring a dedicated Neo4j instance (single-tenancy
assumptions, label/index isolation, schema ownership)
- New service naming in compose commands and log tailing examples
- Extend library list endpoint with `include_workspace` and
`with_item_count` query params to support Daedalus registry mirroring
- Expand search scope clause to three modes: workspace-only, workspace
plus allowed user libraries, and global
- Add `allowed_libraries` field to SearchRequest for Phase-2 JWT claims
- Introduce JWT-based actor resolution using a synthetic service user
(`MCP_JWT_SERVICE_USERNAME`) for Daedalus-originated requests
The integration doc was forward-looking spec but most of it now ships:
Phase 1 (REST workspace + ingest API for Daedalus) ✅ implemented
Phase 2 (MCP server: search/get_chunk/list_*/get_health) ✅ implemented
Phase 3 (per-turn signed-token access control) 📋 deferred
Updated:
- Tool table reflects actual implementation (search, get_chunk,
list_libraries, list_collections, list_items, get_health) instead
of the speculative names (search_knowledge, search_by_category, etc.)
- Project structure matches the as-built layout (tools/discovery.py
exists; no separate browse.py).
- REST API table covers both workspace lifecycle endpoints and ingest
endpoints, with correct routes (/library/api/...).
- Ingest request schema includes content_hash and workspace_id
(the actual idempotency key on the Mnemosyne side).
- Celery task description matches library.tasks.ingest_from_daedalus
rather than the placeholder embed_item.
- Phase 6 checklist marks Phases 1+2 done; adds Phase 3 (per-turn
token access control) with a per-Mnemosyne-side TODO list pointing
at the matching Daedalus-side §9 design.
Internal MCP port stays 22091; public access via nginx on 23090.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
Adds a complete deployment surface for production:
Dockerfile multi-stage 3.12-slim build, collectstatic
baked into the image, runs as non-root mnemosyne
uid/gid 1000.
docker/entrypoint.sh dispatches `web | mcp | worker | beat | migrate
| setup | shell` from a single image, so every
service in compose runs the same artifact.
docker-compose.yaml five services: static-init (one-shot copies
statics into the shared volume on every up),
web (gunicorn), mcp (uvicorn), worker (celery),
nginx. External services (Postgres, Neo4j,
RabbitMQ, S3, Memcached, embedder, reranker)
reached over the 10.10.0.0/24 internal network
and configured via mnemosyne/.env.
nginx/mnemosyne.conf reverse proxy: /library/* and /admin/* → web,
/mcp/* → mcp, /static/* → volume, /metrics
internal-network-only (127/8 + RFC1918), /healthz
proxies to /mcp/health for liveness probes.
.gitea/workflows/ CVE scan + image build, image pushed to
git.helu.ca/r/mnemosyne. Trivy scans pyproject
extras (dev/test/lint/docs) and the built image.
pyproject.toml adds [test], [lint], [docs] extras so the CI
pip-compile step has something to resolve.
README documents the bring-up flow (`docker compose run --rm web migrate`,
then `setup`, then `up -d`), day-to-day commands, and the env-var values
that need adjusting for production (DEBUG=False, KVDB_LOCATION pointing
at the external memcached, AWS keys filled in, etc.).
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
Starlette's Mount("/mcp", ...) only matches /mcp/* paths. A POST to bare
/mcp falls through to the catch-all Django mount and returns 404. The
fast-agent MCP client and the README example both used the no-slash URL,
so the validator was never able to initialize a session — every call
landed in django.request.
Adds a 307 redirect at /mcp so any client URL works, and points the
validator config at /mcp/ directly to skip the redirect round-trip.
Also gitignores fastagent.jsonl (a runtime log file fast-agent writes
into the working directory).
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
OPENAI_BASE_URL was duplicated between .env and fastagent.config.yaml;
the YAML is authoritative, so .env is dead weight. Removing the .env
template and gitignore entry, updating README to reflect.
The real fastagent.secrets.yaml stays gitignored;
fastagent.secrets.yaml.example remains as the documented schema.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
A self-contained sub-project under validator/ that wraps Mnemosyne's MCP
server in a single FastAgent. Use it to confirm — outside of Daedalus —
that Mnemosyne's MCP transport works, every tool registers, args/responses
round-trip, and an LLM can actually drive the tools.
The validator is its own Pallas-consuming project with its own pyproject
(pallas-mcp + fast-agent-mcp), agents.yaml, and fastagent.config.yaml —
matching the pattern used by Iolaus and other Pallas consumers. It does
not import Mnemosyne Python code; it only speaks MCP over HTTP.
The agent never sets workspace_id, so all calls run against the global
scope (libraries with workspace_id IS NULL). Workspace-scoped validation
will come once Daedalus's chat path is wired (Daedalus injects
workspace_id server-side, force-overwriting whatever the LLM produces).
Default model is openai.Qwen3.5-35B-A3B-UD-Q4_K_XL.gguf served by
llama.cpp at nyx.helu.ca:22079/v1. Token provisioning via
`python manage.py create_mcp_token --user <u> --name validator`.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
Adds a "Running Mnemosyne" section with the three commands needed to
operate the system: Django web app (gunicorn), MCP server (uvicorn on
:22091), and Celery worker — with notes on the embedding queue that
the Daedalus ingest task depends on.
Adds the Ouranos host map (Portia / Ariel / Oberon / Nyx / Memcached),
one-time setup commands (migrate, setup_neo4j_indexes, load_library_types),
the Daedalus integration endpoints table, and the two new library types
(business, finance) in the existing Library Types table.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
Workspace scoping is the integration's security-critical property: an
agent in workspace A must never see content from workspace B or from
any global library, regardless of what the calling LLM tries.
Adds `workspace_id` to SearchRequest with __post_init__ normalization
that converts empty strings to None — so "" cannot slip through as a
truthy filter at the Cypher boundary. Extracts the workspace scope
clause to a single string and appends it to all five search queries
(vector, fulltext-chunk, fulltext-concept, graph, image):
($workspace_id IS NULL AND lib.workspace_id IS NULL
OR lib.workspace_id = $workspace_id)
Either workspace-only or global-only — never both — and the operator
precedence is bracketed so a refactor can't accidentally widen it. A
test verifies the literal clause string for that exact reason.
Adds `workspace_id` as a parameter to every MCP tool (`search`,
`get_chunk`, `list_libraries`, `list_collections`, `list_items`).
Deliberately undocumented in tool docstrings so the calling LLM is never
told the parameter exists — it is system-injected by Daedalus's chat
path and force-overwritten before reaching Mnemosyne. Mnemosyne also
validates the value but the security guarantee is enforced upstream.
Adds the `get_health` MCP tool per the Pallas health spec: returns
ok / degraded / error after probing Neo4j, S3, and the embedding
model registration. Used by Daedalus's existing health poller.
Updates the server INSTRUCTIONS string to advertise the new tool and
the two new library types (business, finance).
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
Adds the REST API surface that Daedalus calls to manage workspace
lifecycle and dispatch file ingestion. All endpoints under /library/api/:
POST /workspaces/ create workspace (idempotent on
workspace_id; library_type frozen)
GET /workspaces/{workspace_id}/ workspace status with item/chunk
counts
DELETE /workspaces/{workspace_id}/ delete workspace + reachable
content; concept-safe (orphan-only
Concept GC; concepts referenced
elsewhere are preserved)
POST /ingest/ queue a file for ingest. Idempotent
on (library, source_ref, hash):
same triple → return existing job;
new hash → supersede.
GET /jobs/{job_id}/ poll job status
POST /jobs/{job_id}/retry/ re-dispatch a failed job
GET /jobs/?status=&library_uid= list recent jobs
Workspace-Library lookup uses the unique workspace_id index added in the
schema commit. Concept GC runs as a separate transaction after item/chunk
delete so partial failures don't leave the global graph corrupted.
Tests cover serializer validation, IngestJob ORM behavior, the
(library, source_ref, hash) idempotency query pattern, and auth
boundaries on every new endpoint. Cypher correctness is validated by
manual end-to-end testing — no live Neo4j in unit tests.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
Adds DAEDALUS_S3_* settings (read-only credentials for the Daedalus bucket)
and a small `daedalus_s3.py` helper that fetches a file from Daedalus's
bucket and writes it into Mnemosyne's bucket via default_storage.
Adds the Celery task `library.tasks.ingest_from_daedalus`. Given an
IngestJob row, it:
1. Resolves the target Library (by library_uid).
2. Supersedes a prior Item with the same source_ref but different
content_hash by deleting the old Item + chunks first.
3. Fetches from Daedalus S3, copies into items/{item_uid}/original.{ext}.
4. Creates the Item node, links it to a default Collection.
5. Runs the existing EmbeddingPipeline.process_item.
6. Marks the job completed with chunks/concepts counts.
Failures retry up to 3× with exponential backoff; final failure marks
the job failed with the exception text. Routed to the embedding queue
so single-worker setups must consume it.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
Adds two new content-type-aware library types — `business` for
proposals/marketing/strategy (used by the work-team agents) and `finance`
for statements/tax/market commentary (used by Garth). Each ships with
chunking config, embedding/reranker instructions, an LLM-context prompt
that forbids fabricating financial figures, and a vision prompt.
Adds a unique-indexed `workspace_id` property to `Library` so a node
can be scoped to a Daedalus workspace. Null means a global library;
non-null means workspace-scoped. Search Cypher (added in a later
commit) enforces the boundary.
Adds an `IngestJob` Django ORM model — separate from neomodel — that
tracks asynchronous ingestion lifecycle (Daedalus → S3 → Celery →
embedding pipeline) with idempotency on (library, source_ref, hash).
Migration 0001_initial creates the table.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
Replace plaintext token storage with SHA-256 hashes so leaked database
contents cannot be used to authenticate. Plaintext is generated, shown
once at creation time, and never persisted.
- Add `hash_token()` helper and `MCPTokenManager.create_token()` that
returns `(instance, plaintext)`.
- Replace `token` field with indexed `token_hash`; look up bearers by
hashing the incoming value.
- Update dashboard, management command, and admin to surface plaintext
only at creation. Disable admin "add" since it cannot reveal plaintext.
- Migration drops the old `token` column and adds `token_hash`;
pre-existing tokens are invalidated and must be reissued.
- Remove Phase 4 RAG pipeline in favor of retrieval-only architecture
- Add FastMCP server exposing search, get_chunk, list_libraries tools
- Mount MCP endpoints (streamable HTTP + SSE) via Starlette in ASGI config
- Update README to clarify Mnemosyne is a retrieval engine, not RAG
- Let calling LLMs drive synthesis and iterative retrieval themselves
Replace OPTIONAL MATCH with MATCH for Library-Collection-Item paths to
ensure results are properly scoped to libraries, and remove per-query
score normalization since RRF fuses results by rank rather than score
magnitude.
Replace the single `DATABASE_URL` connection string with individual
environment variables (`APP_DB_NAME`, `APP_DB_USER`, `APP_DB_PASSWORD`,
`DB_HOST`, `DB_PORT`) for more granular database configuration control.
Implement hybrid search pipeline combining vector, fulltext, and graph
search across Neo4j, with cross-attention reranking via Synesis
(Qwen3-VL-Reranker-2B) `/v1/rerank` endpoint.
- Add SearchService with vector, fulltext, and graph search strategies
- Add SynesisRerankerClient for multimodal reranking via HTTP API
- Add search API endpoint (POST /search/) with filtering by library,
collection, and library_type
- Add SearchRequest/Response serializers and image search results
- Add "nonfiction" to library_type choices
- Consolidate reranker stack from two models to single Synesis service
- Handle image analysis_status as "skipped" when analysis is unavailable
- Add comprehensive tests for search pipeline and reranker client
- Introduced a new vision analysis service to classify, describe, and extract text from images.
- Enhanced the Image model with fields for OCR text, vision model name, and analysis status.
- Added a new "nonfiction" library type with specific chunking and embedding configurations.
- Updated content types to include vision prompts for various library types.
- Integrated vision analysis into the embedding pipeline, allowing for image analysis during document processing.
- Implemented metrics to track vision analysis performance and usage.
- Updated UI components to display vision analysis results and statuses in item details and the embedding dashboard.
- Added migration for new vision model fields and usage tracking.
- Implemented custom form widgets for date, time, and datetime fields with DaisyUI styling.
- Created utility functions for formatting dates, times, and numbers according to user preferences.
- Developed views for profile settings, API key management, and notifications, including health check endpoints.
- Added URL configurations for Themis tests and main application routes.
- Established test cases for custom widgets to ensure proper functionality and integration.
- Defined project metadata and dependencies in pyproject.toml for package management.
